Software

» Amira: Visualize, Analyze, Present
   Software platform for visualizing, manipulating and understanding life science and bio-medical data coming from all types of sources and modalities.

   
   http://www.amira.com/

» Biosoft
   Programs for data analysis, graphics and statistics.

   
   http://www.biosoft.com

» DNA Baser: Cell Counter
   Small freeware tool that will help the user to count the cells shown on a computer screen by displaying a transparent or semi-transparent grid over the image.

   
   http://www.dnabaser.com/download/Cell-counter/grid-cell-counter.html

» Determix: Lysandra Online Project
   Provides biological databases, bioinformatics software and interactive keys.

   
   http://determix.com

» Dynamic Clamp
   DYNCLAMP4 is a program to insert artificial synapses and conductances in up to 4 neurons in real time.

   
   http://inls.ucsd.edu/~rpinto/dynclamp.html

» FASTA to Multi-FASTA Converter
   Freeware that will search for all FASTA files in a folder and merge their content into a single file, generating a standard or custom multi-FASTA file.

   
   http://www.dnabaser.com/download/FASTA-to-multi-FASTA/

» Feeding Frenzy
   Bean There Grown That is an educational software CD-ROM and a seed-growing science kit. User grows seeds and performs experiments.

   
   http://www.gzkidzone.com/gamesell/p12733.asp?kzprodnm=p12733.asp

» ImStar
   Bio-imaging software and fully automated systems for research and clinical diagnostic with focus on genetic diseases and cancers.

   
   http://www.imstar.fr

» Indigo Instruments
   Distributes biological and medical and software.

   
   http://www.indigo.com/software/index.html

» Java biology lab
   A wide variety of free online biology software programs.

   
   http://darkwing.uoregon.edu/~bsl/

» Kalaimoscope Motion Tracker for Live Cell Imaging
   Provides biological insights by finding, measuring and tracking image objects. High level statistical analysis tools and grid-computing capabilities are built in.

   
   http://www.kalaimoscope.com

» LIMS
   Laboratory Information Management Systems. Compendium of information on state-of-the-art data management software.

   
   http://www.limsource.com/home.html

» LabSys
   Provides Laboratory Information Management Systems for all laboratory data management issues.

   
   http://www.labsys.ie

» LemnaTec Image processing in Biology
   Image processing hard and software for biotests (Lemna, Bonit, Daphnia) Distributor for various software firms.

   
   http://www.lemnatec.de/

» MPN Assay Analyzer
   Allows the estimation of the number of microorganisms by dilution techniques.

   
   http://www.geocities.com/cpsc319/

» Minnesota Biomedical Business Network
   MBBNet lists health-related software and information management, device, and display companies in Minnesota.

   
   http://www.mbbnet.umn.edu/soft_list.html

» MireSoft
   Provides CiteSmart, a software program to manage bibliographic references when working with PubMed. CiteClick and RefClick can cite and store references with a single click.

   
   http://www.miresoft.net

» Multi-FASTA to FASTA Converter
   Freeware program that will split a multi-FASTA file into multiple standard FASTA files.

   
   http://www.dnabaser.com/download/Multi-FASTA-spliter

» Nonlinear Dynamics
   Product range includes analysis software for 1D and 2D electrophoresis gels, mass spectrometry and LC-MS as well as tools for multivariate statistical analysis.

   
   http://www.phoretix.com/

» Scanalytics, Inc.
   Scientific image processing software and systems for Macintosh and Windows applications, including fluorescence microscopy, array technologies, high throughput imaging analysis, gel analysis, and forensics.

   
   http://www.scanalytics.com

» Serf
   A Windows-based program for electrophysiologists for analysis of single channel currents and spike trains.

   
   http://www.bram.org/serf/serf.shtml

» Spellex Development
   Biotechnology spell checking software for spelling words in the bioscience field including molecular biology, biomedicine, biophysics, microbiology, genetics and biochemistry

   
   http://www.spellex.com/biotech1.htm

» Stat-Ease, Inc.
   Statistical software, training, and consulting on Design of Experiments for scientists and engineers.

   
   http://www.statease.com

» Statistical Computation Website
   Online software for calculating probability, linear correlation and regression, chi-square, t-procedures and ANOVA from Vassar College.

   
   http://faculty.vassar.edu/~lowry/VassarStats.html

» The Frangakis Group
   Provides an electron tomography toolbox for Amira. The EMPackage is a powerful toolbox for three-dimensional electron microscopy in Amira.

   
   http://www.embl-heidelberg.de/frangakis/Amiratools.htm